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Updates to the PDBe homepage
The homepage at PDBe has a fresh new look! We have upgraded the software hosting the PDBe homepage, giving a more clean-cut view and better experience on mobile devices. We have also updated content accessible from the homepage, including a direct link to PDBe-KB, easier access to PDBe services,� |
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Mol* updated at PDBe and PDBe-KB - download superposed coordinates, view UniProt numbering and more�
A new version of the 3D molecular visualisation software, Mol* (molstar.org), is now being used at PDBe and PDBe-KB pages, bringing a host of improvements and new features. |
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Predicted complexes from ModelArchive now on PDBe-KB pages
High-quality, predicted protein complexes, generated using RoseTTAFold and AlphaFold, are now available in ModelArchive and accessible through the 3D-Beacons Network. These predicted complexes are also integrated into the PDBe-KB aggregated views of proteins. |
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RNA topology viewer added to PDBe pages
The PDBe entry pages now have a new, interactive, RNA topology viewer developed in collaboration with the RNAcentral and Rfam teams at ÀÖÌìÌÃÓÎÏ·ÍøÕ¾. |
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SIFTS data now included in PDBe mmCIF files
Data on sequence level mapping through the SIFTS process can now be retrieved directly from updated mmCIF files, available on PDBe entry pages. |
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2022 Calendar: Beauty at a molecular level
'Tis the season for the new PDBe calendar! Our calendar for 2022 is now available to view and print - just in time for the New Year. |
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Performance improvements and additional annotations on the PDBe-KB Aggregated Views of Proteins
The PDBe-KB Aggregated Views of Proteins (https://pdbe-kb.org) have enabled our users to easily access collated structural and functional data from the whole PDB archive for their protein of interest. |
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PDBe Download Service for bulk download of data
The PDBe pages provide a number of tools and visualisations to support analysis and understanding of PDB structures, however sometimes it is still necessary for users to have access to the data files. |
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3D-Beacons Network: protein structure data, all in one place
A new platform called 3D-Beacons Network brings together experimentally determined and predicted protein structure models and related data from several providers and makes them freely available, all in one place. |
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AlphaFold’s protein structure predictions now available to explore
DeepMind and EMBL’s European Bioinformatics Institute (ÀÖÌìÌÃÓÎÏ·ÍøÕ¾) have launched the AlphaFold Database (AlphaFold DB), a joint project to openly and freely share millions of AlphaFold protein structure predictions with the scientific community. |
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A Tribute to Prof. Richard R. Ernst
We were saddened to learn of the passing of Prof. Richard R. Ernst on June 4th 2021. Prof. |
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Updated versions of 2D and 3D viewers now available on PDBe entry pages
Mol* has improved even more, allowing you to easily create bespoke and stunning visualisations with more customisation, including display of interactions and measurements. |