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PDBeChem : Atoms of Molecule
Molecule : CIR
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 25
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C |
C |
C1 |
N |
N |
N |
0 |
3.505 |
0.297 |
-0.037 |
2 |
O |
O |
O1 |
N |
N |
N |
0 |
4.165 |
-0.036 |
0.919 |
3 |
OXT |
O |
O2 |
N |
N |
Y |
0 |
3.886 |
1.346 |
-0.783 |
4 |
CA |
C |
C2 |
S |
N |
N |
0 |
2.258 |
-0.469 |
-0.396 |
5 |
N |
N |
N2 |
N |
N |
N |
0 |
2.308 |
-1.801 |
0.221 |
6 |
C3 |
C |
C3 |
N |
N |
N |
0 |
1.03 |
0.286 |
0.119 |
7 |
C4 |
C |
C4 |
N |
N |
N |
0 |
-0.24 |
-0.426 |
-0.352 |
8 |
C5 |
C |
C5 |
N |
N |
N |
0 |
-1.467 |
0.329 |
0.162 |
9 |
N6 |
N |
N6 |
N |
N |
N |
0 |
-2.684 |
-0.352 |
-0.289 |
10 |
C7 |
C |
C7 |
N |
N |
N |
0 |
-3.894 |
0.137 |
0.047 |
11 |
O7 |
O |
O7 |
N |
N |
N |
0 |
-3.976 |
1.143 |
0.724 |
12 |
N8 |
N |
N8 |
N |
N |
N |
0 |
-5.012 |
-0.49 |
-0.368 |
13 |
HXT |
H |
HO2 |
N |
N |
Y |
0 |
4.695 |
1.804 |
-0.516 |
14 |
HA |
H |
H2 |
N |
N |
N |
0 |
2.194 |
-0.572 |
-1.479 |
15 |
H2 |
H |
HN21 |
N |
N |
Y |
0 |
2.367 |
-1.733 |
1.226 |
16 |
H |
H |
HN22 |
N |
N |
N |
0 |
1.513 |
-2.358 |
-0.057 |
17 |
H31 |
H |
H31 |
N |
N |
N |
0 |
1.05 |
0.311 |
1.208 |
18 |
H32 |
H |
H32 |
N |
N |
N |
0 |
1.041 |
1.304 |
-0.269 |
19 |
H41 |
H |
H41 |
N |
N |
N |
0 |
-0.259 |
-0.452 |
-1.442 |
20 |
H42 |
H |
H42 |
N |
N |
N |
0 |
-0.251 |
-1.444 |
0.035 |
21 |
H51 |
H |
H51 |
N |
N |
N |
0 |
-1.448 |
0.354 |
1.251 |
22 |
H52 |
H |
H52 |
N |
N |
N |
0 |
-1.457 |
1.347 |
-0.226 |
23 |
HN6 |
H |
HN6 |
N |
N |
N |
0 |
-2.618 |
-1.156 |
-0.829 |
24 |
HN81 |
H |
HN81 |
N |
N |
N |
0 |
-4.947 |
-1.293 |
-0.908 |
25 |
HN82 |
H |
HN82 |
N |
N |
Y |
0 |
-5.884 |
-0.138 |
-0.126 |
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